Complete step-by-step tutorial on caring for seedlings after one week of growth. Learn how to care for your new seedlings with these photos and tips for thinning, transplanting, and watering.
You can find more seed starting information in the Seed Starting Guide.

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For this part of the vegetable gardening 101 series, we'll be taking care of the seedlings that have sprouted from the seeds planted about a week ago.
It's a pretty quick task, but also an important one since it will give your baby seedlings the strong start they need for the growing season.
Caring for seedlings after their first week of growth consists of:
- Thinning
- Transplanting to other pots, if needed
- Watering well (and fertilizing, maybe)
- Providing strong light
I'm using the seed tray I started last week to walk you through the steps so you can easily see what your seedlings may look like before (and then after) thinning, transplanting, and watering.
I'll also provide you with some tips I've learned after years of starting my own seeds (spoiler: not all seeds sprout - it's not just you!).
Caring For Seedlings at Week 1
1. Evaluate your seed trays
The tray pictured above is planted with tomatoes in 4-inch pots and most of the tomatoes have come up (they're pretty easy).
You may remember from the seed starting tutorial that I like to plant tomatoes and peppers in larger pots (instead of the 6-cell seedling pots) since they grow much longer inside to have larger plants to put into the garden, and it eliminates one transplanting step.
Note on peppers: the peppers aren't pictured because they take much longer to germinate than tomato seeds, about 1-2 weeks longer, so you will have to provide this care for them a little later. I still start them at the same time, however, since I don't plant peppers until the first week of June most of the time - peppers like it reliably hot. (You can read more about peppers in the Ultimate Sweet Pepper Guide and Ultimate Hot Pepper Guide.)
There are two things you may notice right away from the above photo:
- There are lots of seedlings clumped together (um...aren't you supposed to plant only 2-4 seeds?)
- There are empty pots.
It is important to plant 2-4 seeds - not all seeds are viable, which is why you need to put more than one seed in each cell or pot.
When I have fresh seed packets I've just purchased I do plant 2-4 seeds - you can see that there are some pots in the photo with only 2-4 seedlings.
However, as I show here, you can keep seeds from year to year and when a packet of seeds is more than 2 years old it's a good idea to plant more to account for a potentially spotty germination rate.
The tomato seeds planted here were obviously still going strong, so I just have more thinning to do.
And the empty pot?
This is normal - sometimes seeds just won't germinate for some reason or another. I wasn't surprised by this, as it was another old seed packet - but this time it was 7 years old (hey, it doesn't hurt to try).
It was a different variety of Roma tomato, and I was planting other Romas that I knew I could transplant if none came up.
Also, it's not unusual for some seeds to take two weeks to germinate, like the peppers I mentioned, so sometimes it's not a failure yet!
2. Thin out seedlings
You want to thin the seedlings now in the first couple weeks of life before the roots get too tangled.
Thinning is something I know people struggle with, thinking they are killing or wasting the plants.
It's just a fact of starting your own seeds:
You must thin now if you want strong, healthy plants that will survive outside.
Of course, you can transplant every little seedling and you will be overrun with plants you can't use. Or you can simply compost them like we do all our other garden waste.
On quick-to-mature plants like lettuce or spinach that can be planted out when they're smaller, I sometimes leave two seedlings to a 6-pack cell, but for all others, they should eventually be thinned to 1 plant per cell.
Here are some tips when thinning your seedlings:
- At this week 1 stage, it's a good idea to make sure your bases are still covered by keeping 2-3 of the strongest seedlings in each cell. Then if you do lose a seedling or two after the thinning phase you will have at least one to grow to maturity.
- When you do leave more than one plant, thin to the strongest plant at week 2 or 3 by snipping off the weaker seedlings at the base of the stem with small scissors - by that time their roots will be growing together and you don't want the strong plant disturbed.
- You can use your fingers to gently pull out the little seedling at the week 1 stage - the roots are small enough that they easily pull out. Start at the outside and just pull a few at a time.
- You can also use a narrow tool - I like a chopstick - to help remove the unwanted seedlings from the roots up - just be careful not to dislodge the seedlings you do want to stay.
3. Transplant Seedlings
While you will be composting many of your thinned seedlings, there will also be some to move to other pots, either to fill in for those that didn't germinate or because you've decided you want a few more of that variety.
How to Transplant Seedlings
- Use your narrow tool/chopstick to gently push the roots up from the side - you want to make sure the seedlings have a good amount of roots you can see in the soil.
- Use the tool to make a shallow hole in the new pot.
- Plant the seedlings with some space between them, using your tool to gently push the root down into the hole and covering back up with soil.
- Use your finger to tamp the soil firmly around the newly planted seedlings.
You will always want to transplant a number of seedlings, if they are available, because you don't know how many will survive (yes, you'll have to thin these, too, later if they do...).
Here's what the example tray looks like before and after thinning and transplanting:
So your seedling tray at week one should look like the tray on the bottom with 1-3 seedlings only in each pot.
Note: The empty pot in the after photo has a new seed planted of the variety that didn't come up the first time - I'll have to wait another week for them to sprout.
Here's another before-and-after thinning example - a tray of brassicas (cabbage, cauliflower, broccoli) in 6-cell trays:
As you can see, some cells in the before photo have an abundance of seedlings just like the tomatoes did and some have just a few or even none (the slightly larger cells at the top right contain the slow germinating peppers so these will be cared for in a week or two).
For the cells with lots of seedlings, just take the same steps of thinning and transplanting that we did for the tray of tomatoes.
I do want to point one of the quirks of starting plants from seeds - just to let you know that you didn't necessarily do anything wrong:
Some varieties of seeds are just less viable than others - even when the seeds are fresh.
As an example, in the two 6-cell trays of cauliflower seedlings pictured above, the Cheddar, Purple, and White cauliflower were all brand new seed and the Romanesco seed was actually 3 years old!
I have problems starting Cheddar and purple varieties of cauliflower every year - they are just a touchy seed. We'll see if that tiny purple cauliflower sprout actually grows - sometimes they just stay that size and then disappear.
So, don't despair - just try a new variety next time or stick to the vegetables and flowers that grow well for you and buy nursery starts of the types that are harder to grow.
4. Water Your Seedlings
After thinning and transplanting, it time to water around (never on top) your seedlings with a light water stream.
I like to use warm water since I use a seedling heat mat to help the peppers and tomatoes germinate and grow better - it just seems like it's better than putting cold water in and then making the heat mat work to heat it up.
After watering, no matter how gentle your stream was, some seedlings will be laying on the soil. Just use your finger to gently lift them up and re-firm the soil back around them to help them stand up strong again.
Water From the Bottom
To make sure there is enough water for the next week, remove one of the pots/cells and fill the bottom of the tray with water about half-way full.
This is "watering from the bottom" and it is the best way to water your seedlings from now on to encourage deep rooting.
From now on, this is the best way to water your trays, making sure they have enough water so the plants can take it up from the roots.
What about fertilizing?
While optional at this point, you may add a half-strength organic fish fertilizer (make sure to get "odorless" though - it will still smell some, but not nearly as bad as regular fish emulsion - this is a good option).
I usually wait until about week 3, though, because it's a good idea to wait until all the seedlings have sprouted before fertilizing.
5. Provide Strong Light For Your Seedlings
Place your seedling trays back under your strong light.
I used to use a basic shop light like shown with a warm bulb and a cool bulb for an even spectrum, but they are harder to find, so if you need one, this LED light is similar (I've read that LED lights don't dry out the soil as much).
Make sure that the light stays as close as possible to the tops of the plants (ideally just a few inches) and check them daily, moving the light up when needed as they grow.
6. Let Them Grow
That's it for week one of caring for seedlings - it took only about 10-15 minutes to pull extra seedlings, transplant some, water and then put them back under the lights.
Over the next few weeks keep caring for your seed trays by:
- Watering from the bottom only, keeping the trays half-full of water.
- Adding half-strength organic fertilizer at about week three.
- Thin/transplant any other seedlings that need it.
- Remove all but the strongest seedling from all pots by clipping weaker seedlings at the base of the stem.
Once they are planted, there's not a lot of time involved and it's fun seeing your little "babies" come up!
We'll check in again at the 6-week mark when we'll "harden off" some of the seedlings to plant and transplant others to larger pots.
More in the Vegetable Gardening 101 Series:
Note: This article has been updated - it was originally published in 2009, updated in 2016 and again in 2022.
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Chris says
I just stumbled upon your website, love it by the way! My seedlings have sprouted, a little early, I think, and are under the light now. I'm thinking the lights do not have to be on 24/7 for 8 weeks? I have been turning it off at night so they are getting from 8am until around 10pm of light, 14 hours daily. And the light is about 3 inches from my tomato seedlings. It is a T8 pink LED grow bulb, so it's cool to the touch. The plants look great. Is is supposed to be on continuously? Thanks for any help.
Jami says
Glad to have you reading, Chris! No, you don't want the lights on continuously - you want to mimic natural light. Have the lights on for 16 hours and off for 8, that's the recommendation. Your life will be easier if you get one of those cheap timers that attach to the cord and set it to go on and off at the set time. 🙂
Oh and keep the light as close to the seedlings as possible - almost touching, raising as the seedlings grow. This will keep them from growing too lanky trying to reach the light.
Have fun!
Carole Ingram says
Thank you Jami, this is good information particularly the week 6 hardening. Here in north Florida, I start my seeds in the same manner, but after watering, I cover the seed trays with plastic wrap and seal the sides. This creates mini green houses that can be easily transported inside or outside, depending on the temperature and/or time of day.
Jami says
Great tip, Carole - thanks!
Faith from Indiana says
Thank you for this series. Just found you via pinterest and SO THANKFUL. this is our first real garden and you have great tips all in one place!!! cant wait to go back through your archives!!
Jami says
Oh, I'm so happy to read this, Faith! My goal is to let everyone know that gardening doesn't have to be hours of weeding or watering drudgery. It can be happy planting, picking and eating. 🙂
Shelley says
I start my plants on a heat mat for sprouting and then under lights on a pvc stand on the kitchen counter. When they get a couple of inches tall they go down to the guest bathroom on a counter covered with a board, with lights hanging from the ceiling. New plants are started upstairs. At the appropriate time the downstairs plants go onto tables in front of the south windows in the dining room, then out to the little greenhouse. From there the tomatoes and peppers go upstairs on the deck and other plants go to the garden. There's always something in rotation! In the winter I grow lettuce under the kitchen grow lights. We had an infestation of soil flies and one day last week I harvested all the lettuce and put the planters out in cold to freeze. We still have about 4' of snow on the ground but I'm itching to start, although I know from experience that planting too soon is a big mistake. I'm getting my satisfaction by following your gardening series!
Jami says
Wow, you have an impressive system, Shelly! That's so great to get some home-grown produce all year long.
Jami @ An Oregon Cottage says
Good idea about garage or barn! It's best to keep the seedlings on the cool side anyway, so as long as it doesn't freeze, you can plant any cool-loving crop. If it stays above about 45 degrees, you'd probably be OK with starting warm-loving plants (especially if you could give them a head start with a heat pad underneath them for first week).
Spun row cover is pretty inexpensive, and you can just throw it over the tops without damaging the plants - it would make it a few degrees warmer at night so you might not need to bring them in, depending on how cold it got.
Good luck!
rachelc says
I'm pretty sure its only one of my cats that likes to eat the plants, he's a weirdo. I can give him a spinach leaf when I'm making myself a salad and he'll eat it. The only rooms I can really keep him out of is the bathroom and the bedroom there really isn't room for much in either one of those rooms. I think I might try putting the seedlings out in the garage or pole barn. It has been warm enough out lately, and if I had to bring them in at night I could always hide them from the darn cat in a closet. I think I've talked my hubby into making me some of the cold frames like you have so hopefully I can use those to help get some seedlings going.
Jami @ An Oregon Cottage says
Rachel-
Wow, I have zero experience with cats. They really eat the plants? I think you're right that you have to figure out a way to protect them from the cats. Is there a room you can keep the door closed with the plants in?
I haven't had luck with the jiffy peat pots either - I think they dry out too fast when they are outside hardening off. That's just my guess. You might have better luck if you transplant the seedlings into bigger pots (4-in.)and let them get a little bigger before hardening them off. This would be especially true of tomatoes and peppers and bigger plants like that.
And keep the cats away! 🙂
rachelc says
I plan on starting seeds soon for my veggie garden, I won't be able to plant them til May most likely- Indiana weather = pain in the butt. I always have trouble if i try to start them inside, my cats like to eat them! And I always have to remind myself when it'll be too cold outside at night, to bring them in and somehow protect them from the crazy cats. I haven't had too much luck in the past starting plants from seeds. It seems to work best with my flowers rather than my veggies. But I try and try again... I thought about trying to use something like an aquarium to get them started inside so cats can't get them. I've used the jiffy plant starters in the past and those seem to work well, but I always have trouble with them dying when I try to harden them and move them outside. Any tips?
Rachel